Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015948729.1_cds_XP_016489898.1_80374
CDS Infomation

[gene=LOC107809740] [db_xref=GeneID:107809740] [protein=omega-hydroxypalmitate O-feruloyl transferase-like] [protein_id=XP_016489898.1] [location=complement(22466..23857)] [gbkey=CDS]
Sequence

ATGGCTCCACTGGTTGAAGAACTCCAATTTCCTCATCTTGAAATACCTCTAACCATCAAT
TCTATATCTCCAATATTACCTGCAAACCCCATCCCCGCATCCCATGGTGACAGCCTTTAC
CTCTCAAATCTAGATGATATGATCGGAGCTCGCGTTTTTACTCCAACTATGTACTTCTAT
CGCGATGCAGGGAAACCGGCGGCTGTCATCAAAGTATTAAAAGAAGCTCTTGCAAGTGTA
CTGGTGCCGTATTATCCATTCTCTGGTAGGCTACGAGAAACAGAAAATGGCAAGTTGGAG
GTGTTTTTTGGACCTAACCAAGGCGTTCTCCTGGTTGAGGCACGTTCAGAAATGACGTTA
GCCAATCTTGGAGATTTAAGTGTGCCAAATCCAGCATGGACAAACTTGGTTTACAGCTTT
CCAAATGAAGAACAATACAAAGTGATTGATATGCCATTGCTAATAGCACAAGTGACAAGA
TTCAGGTGTGGTGGATTTAGCCTGGGATTAAGAATTTGCCATTGCCTTTGTGATGGGGTT
GGAGCAATGCAGTTCCTTAGTGCTTGGGCTTCCACTGCAAGATTGAGCTCATTGACAGTC
AACCCCAAGCCATGTTGGGATAGGGAAATACTGAGGCCCCGTAATCCACCACTGATTCAA
CACCCACACATTGAATTCAAGAGAATAGATGATGGATCAAGCTTAACGAGGAGTCTTTGG
GTAGTGAAGCCAGTTCAAAAGTGTTATCGTGTTAGCCGAGAGTACCAAGCCCATTTGAAG
AGGTTGGTGCAGTCATCAGTTGGTAATTTGTCATGCACCACCTTTGATGCAATGGCAGCT
CACGTATGGAGATCATGGGTCAAGGCACTAGATGTTAGGCCTCTTGATTACGAGCTGAGG
CTAACATTTTCGGTGAATGGCAGATCAAGGCTTACAAATCCACCACTGAAACAAGGCTTC
TATGGGAATGCAGTATGTGTGGCATGTGCCACTAGCACTGTCTCAGGCCTCGTCAATGGG
CCTCTTTCGGAGACCACACTTTTGGTTCGAAAGGCAAGGCTTTCCGTCTCCGAGCCATAT
TTGAGATCCACAATTGATTATATCCAACTACATAGGCCTACCAGGCTAGAATTTGGTGGG
AAGCTCACCATAACCCAATGGACCAGATTCTCAATGTACGAAACTGCCGATTTTGGTTGG
GGGAGACCCATTTACGCAGGCCCAATTGATCTCACACCCACCCCACAGGTTTGTGTTTTC
TTGCCACATGATGATCCTGATTCTGATTCTGATGGAACCATGCTCGTCTGCATTTGCTTG
CCCGAGGCTGCTTGCCATAGATTCAGAGACCTTTTCTGCCTCTTCGATTCAGACCATCAA
TTGCCTTGTTAA

Peptide Sequence

PEP ID

XP_016489898.1
PEP Infomation

PREDICTED: omega-hydroxypalmitate O-feruloyl transferase-like [Nicotiana tabacum]
Sequence

MAPLVEELQFPHLEIPLTINSISPILPANPIPASHGDSLYLSNLDDMIGARVFTPTMYFY
RDAGKPAAVIKVLKEALASVLVPYYPFSGRLRETENGKLEVFFGPNQGVLLVEARSEMTL
ANLGDLSVPNPAWTNLVYSFPNEEQYKVIDMPLLIAQVTRFRCGGFSLGLRICHCLCDGV
GAMQFLSAWASTARLSSLTVNPKPCWDREILRPRNPPLIQHPHIEFKRIDDGSSLTRSLW
VVKPVQKCYRVSREYQAHLKRLVQSSVGNLSCTTFDAMAAHVWRSWVKALDVRPLDYELR
LTFSVNGRSRLTNPPLKQGFYGNAVCVACATSTVSGLVNGPLSETTLLVRKARLSVSEPY
LRSTIDYIQLHRPTRLEFGGKLTITQWTRFSMYETADFGWGRPIYAGPIDLTPTPQVCVF
LPHDDPDSDSDGTMLVCICLPEAACHRFRDLFCLFDSDHQLPC

Transcript Sequence

Gene sequence data has not been registered.